Index
B
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C
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D
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E
|
F
|
G
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I
|
L
|
M
|
N
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O
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P
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R
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S
|
V
|
W
B
bids_split_filename() (in module fitlins.interfaces.bids)
BIDSDataSink (class in fitlins.interfaces.bids)
BIDSDataSinkInputSpec (class in fitlins.interfaces.bids)
BIDSDataSinkOutputSpec (class in fitlins.interfaces.bids)
BIDSError
BIDSSelect (class in fitlins.interfaces.bids)
BIDSSelectInputSpec (class in fitlins.interfaces.bids)
BIDSSelectOutputSpec (class in fitlins.interfaces.bids)
BIDSWarning
build_report_dict() (in module fitlins.viz.reports)
C
CollateWithMetadata (class in fitlins.interfaces.utils)
CollateWithMetadataInputSpec (class in fitlins.interfaces.utils)
CollateWithMetadataOutputSpec (class in fitlins.interfaces.utils)
collect_participants() (in module fitlins.utils.bids)
ContrastMatrixPlot (class in fitlins.interfaces.visualizations)
ContrastMatrixPlotInputSpec (class in fitlins.interfaces.visualizations)
D
decompose_dscalar() (in module fitlins.interfaces.visualizations)
default_path() (in module fitlins.cli.run)
deroot() (in module fitlins.viz.reports)
DesignCorrelationPlot (class in fitlins.interfaces.visualizations)
DesignCorrelationPlotInputSpec (class in fitlins.interfaces.visualizations)
DesignMatrix (class in fitlins.interfaces.nistats)
DesignMatrixInputSpec (class in fitlins.interfaces.abstract)
DesignMatrixInterface (class in fitlins.interfaces.abstract)
DesignMatrixOutputSpec (class in fitlins.interfaces.abstract)
DesignPlot (class in fitlins.interfaces.visualizations)
dict_intersection() (in module fitlins.utils.collections)
displayify() (in module fitlins.viz.reports)
dscalar_from_cifti() (in module fitlins.interfaces.nistats)
E
EstimatorOutputSpec (class in fitlins.interfaces.abstract)
F
FirstLevelEstimatorInputSpec (class in fitlins.interfaces.abstract)
FirstLevelEstimatorInterface (class in fitlins.interfaces.abstract)
FirstLevelModel (class in fitlins.interfaces.nistats)
fitlins (module)
fitlins.cli (module)
fitlins.cli.run (module)
fitlins.interfaces (module)
fitlins.interfaces.abstract (module)
fitlins.interfaces.bids (module)
fitlins.interfaces.nistats (module)
fitlins.interfaces.utils (module)
fitlins.interfaces.visualizations (module)
fitlins.utils (module)
fitlins.utils.bids (module)
fitlins.utils.collections (module)
fitlins.utils.config (module)
fitlins.utils.strings (module)
fitlins.viz (module)
fitlins.viz.contrasts (module)
fitlins.viz.corr (module)
fitlins.viz.reports (module)
fitlins.workflows (module)
fitlins.workflows.base (module)
G
get_fitlins_config() (in module fitlins.utils.config)
get_parser() (in module fitlins.cli.run)
GlassBrainPlot (class in fitlins.interfaces.visualizations)
GlassBrainPlotInputSpec (class in fitlins.interfaces.visualizations)
I
init_fitlins_wf() (in module fitlins.workflows.base)
INIT_MSG() (in module fitlins.cli.run)
input_spec (fitlins.interfaces.abstract.DesignMatrixInterface attribute)
(fitlins.interfaces.abstract.FirstLevelEstimatorInterface attribute)
(fitlins.interfaces.abstract.SecondLevelEstimatorInterface attribute)
(fitlins.interfaces.bids.BIDSDataSink attribute)
(fitlins.interfaces.bids.BIDSSelect attribute)
(fitlins.interfaces.bids.LoadBIDSModel attribute)
(fitlins.interfaces.bids.ModelSpecLoader attribute)
(fitlins.interfaces.utils.CollateWithMetadata attribute)
(fitlins.interfaces.utils.MergeAll attribute)
(fitlins.interfaces.visualizations.ContrastMatrixPlot attribute)
(fitlins.interfaces.visualizations.DesignCorrelationPlot attribute)
(fitlins.interfaces.visualizations.GlassBrainPlot attribute)
(fitlins.interfaces.visualizations.Visualization attribute)
L
LoadBIDSModel (class in fitlins.interfaces.bids)
LoadBIDSModelInputSpec (class in fitlins.interfaces.bids)
LoadBIDSModelOutputSpec (class in fitlins.interfaces.bids)
M
main() (in module fitlins.cli.run)
MergeAll (class in fitlins.interfaces.utils)
ModelSpecLoader (class in fitlins.interfaces.bids)
ModelSpecLoaderInputSpec (class in fitlins.interfaces.bids)
ModelSpecLoaderOutputSpec (class in fitlins.interfaces.bids)
N
NistatsBaseInterface (class in fitlins.interfaces.nistats)
O
output_spec (fitlins.interfaces.abstract.DesignMatrixInterface attribute)
(fitlins.interfaces.abstract.FirstLevelEstimatorInterface attribute)
(fitlins.interfaces.abstract.SecondLevelEstimatorInterface attribute)
(fitlins.interfaces.bids.BIDSDataSink attribute)
(fitlins.interfaces.bids.BIDSSelect attribute)
(fitlins.interfaces.bids.LoadBIDSModel attribute)
(fitlins.interfaces.bids.ModelSpecLoader attribute)
(fitlins.interfaces.utils.CollateWithMetadata attribute)
(fitlins.interfaces.utils.MergeAll attribute)
(fitlins.interfaces.visualizations.Visualization attribute)
P
plot_and_save() (in module fitlins.viz)
plot_contrast_matrix() (in module fitlins.viz.contrasts)
plot_corr_matrix() (in module fitlins.viz.corr)
plot_dscalar() (in module fitlins.interfaces.visualizations)
prepare_contrasts() (in module fitlins.interfaces.nistats)
R
run_fitlins() (in module fitlins.cli.run)
S
SecondLevelEstimatorInputSpec (class in fitlins.interfaces.abstract)
SecondLevelEstimatorInterface (class in fitlins.interfaces.abstract)
SecondLevelEstimatorOutputSpec (class in fitlins.interfaces.abstract)
SecondLevelModel (class in fitlins.interfaces.nistats)
snake_to_camel() (in module fitlins.utils.strings)
V
Visualization (class in fitlins.interfaces.visualizations)
VisualizationInputSpec (class in fitlins.interfaces.visualizations)
VisualizationOutputSpec (class in fitlins.interfaces.visualizations)
W
write_derivative_description() (in module fitlins.utils.bids)
write_full_report() (in module fitlins.viz.reports)
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